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Trans-eQTLs across different cancer types

In trans-eQTL analysis, we identified 231,210 eQTL−gene pairs at FDR < 0.05 in 33 cancer types for users to search or browse.

     

e.g., "PRAD"
e.g., "rs7231881"
e.g., "SMAD4"


     

Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
Gene symbol
Gene position (hg19)
Beta
t-stat
p-valule
Display
THCA rs72831641 chr2:112955815 A/G RGPD5 chr2:110550335-110615272:+ -0.52 -7.47 3.96E-13 Box Plot
THCA rs72831642 chr2:112967234 G/A RGPD5 chr2:110550335-110615272:+ -0.5 -6.91 1.57E-11 Box Plot
THCA rs72831649 chr2:112986604 A/G RGPD5 chr2:110550335-110615272:+ -0.49 -6.8 3.16E-11 Box Plot
THCA rs72831651 chr2:112986883 A/T RGPD5 chr2:110550335-110615272:+ -0.5 -7.02 7.43E-12 Box Plot
THCA rs72831656 chr2:112992396 T/A RGPD5 chr2:110550335-110615272:+ -0.49 -6.86 2.14E-11 Box Plot
THCA rs72831658 chr2:112995728 A/G RGPD5 chr2:110550335-110615272:+ -0.49 -6.86 2.14E-11 Box Plot
THCA rs72831660 chr2:112997849 T/G RGPD5 chr2:110550335-110615272:+ -0.49 -6.86 2.14E-11 Box Plot
THCA rs72831662 chr2:113003385 G/A RGPD5 chr2:110550335-110615272:+ -0.47 -6.72 5.03E-11 Box Plot
THCA rs72831664 chr2:113008633 T/A RGPD5 chr2:110550335-110615272:+ -0.48 -6.8 3.18E-11 Box Plot
THCA rs72831685 chr2:113036555 A/T RGPD5 chr2:110550335-110615272:+ -0.47 -6.87 2.04E-11 Box Plot
THCA rs72831688 chr2:113041347 G/A RGPD5 chr2:110550335-110615272:+ -0.47 -6.87 2.04E-11 Box Plot
THCA rs72833410 chr2:113054119 G/A RGPD5 chr2:110550335-110615272:+ -0.48 -6.91 1.58E-11 Box Plot
THCA rs72833412 chr2:113061119 G/A RGPD5 chr2:110550335-110615272:+ -0.47 -6.86 2.21E-11 Box Plot
THCA rs72833413 chr2:113061250 A/C RGPD5 chr2:110550335-110615272:+ -0.47 -6.86 2.21E-11 Box Plot
THCA rs72833414 chr2:113063116 T/C RGPD5 chr2:110550335-110615272:+ -0.48 -6.91 1.58E-11 Box Plot